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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_26855_28973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26855 - 28973

Intron Length:

2119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

CCTTCCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

AATAGCTGAAAG

Flanking Amino Acid:

KHPMDLSTIKSKLENREYRD

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

71.4

35.1

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

80.5

0.69

0.7

72.9

31.9

Minor 5ss

45.8

-0.4

2.7

57.2

41.4

Minor BPS

44.9

-0.5

50.57

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009757

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010243

15711 - 38392

22682

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549