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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_34847_35540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34847 - 35540

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGT

5'SS Class:

major

3'SS Sequence:

GTCTGCCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GTATCTTGATCT

Flanking Amino Acid:

AQRLAELQEQLKAVHEQLAA

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

61.5

45.6

Major BPS

83.8

0.84

73.6

41.8

Major PPT

73.2

0.52

0.9

69.3

36.9

Minor 5ss

42.9

-0.8

3.5

65.1

46.1

Minor BPS

56.8

0.29

1.7

74.72

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009757

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010243

15711 - 38392

22682

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549