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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_35741_36762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35741 - 36762

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCCT

5'SS Class:

major

3'SS Sequence:

AATTATTCTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CATTTTATAATT

Flanking Amino Acid:

KKSNSNSSTSSSKKEPVTVK

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

66.3

45.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

66.9

0.38

1.1

69.3

40.9

Minor 5ss

35.9

-1.6

49.4

46.4

Minor BPS

58.1

0.33

1.6

73.1

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009757

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010243

15711 - 38392

22682

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549