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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_45418_45618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

45418 - 45618

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACCC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGGCAT

U12 Branch Point Sequence:

TTTTGGGTAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

63.4

41.4

Major BPS

47.3

-0.1

1.4

55.1

42.1

Major PPT

77.6

0.62

0.8

73.1

37.2

Minor 5ss

31.8

-2.1

3.3

42.8

44.3

Minor BPS

45.1

-0.5

2.9

66.67

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549