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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_46004_47717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

46004 - 47717

Intron Length:

1714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GCGGTGTCACCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

76.9

0.6

0.7

68.7

31.7

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

33.6

-1.3

2.2

30.75

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549