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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_48264_49998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48264 - 49998

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TGAACTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TGGTGCTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

0.42

1.1

57.3

41.7

Major PPT

68.2

0.41

1.1

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

59.7

0.38

1.9

77.77

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549