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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_50458_50568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50458 - 50568

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

CTCGGCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CTCACGGTGACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

65.1

40.7

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

68.7

0.42

60.7

40.2

Minor 5ss

30.8

-2.2

2.8

34.7

Minor BPS

39.7

-0.9

2.6

46.58

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549