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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005406.1_51293_51485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51293 - 51485

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TCCGGCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TGGGGTCTCACG

Flanking Amino Acid:

ERLRREQERMRSRDDEDAME

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

69.5

0.44

64.6

41.4

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

36.2

-1.2

2.3

39.77

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027896

Chromosome:

PEDO01005406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024813

25659 - 52207

26549