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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005414.1_3541_3886_F

Intron Information:

Intron Rank:

139794

Intron Class:

major

Intron Phase:

Intron Coordinates:

3541 - 3886

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCATGTTCC

5'SS Class:

major

3'SS Sequence:

TTTCTCCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CTGATGTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

69.4

39.8

Major BPS

73.5

0.58

79.3

29.4

Major PPT

85.5

0.8

0.7

24.1

Minor 5ss

39.7

-1.2

3.9

57.6

40.2

Minor BPS

44.5

-0.3

2.1

60.49

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025162

Chromosome:

PEDO01005414.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048483

3413 - 5627

2215