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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005449.1_1789_1889_R

Intron Information:

Intron Rank:

151226

Intron Class:

major

Intron Phase:

Intron Coordinates:

1789 - 1889

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

TGCTAGTGAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

64.3

0.35

1.2

55.4

Major PPT

88.3

0.86

0.7

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

43.1

-0.6

2.3

49.83

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028888

Chromosome:

PEDO01005449.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038759

885 - 2520

1636