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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005449.1_2546_2667_R

Intron Information:

Intron Rank:

151220

Intron Class:

major

Intron Phase:

Intron Coordinates:

2546 - 2667

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GAATGTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

88.8

25.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

88.3

0.86

0.8

88.2

29.1

Minor 5ss

22.7

-3.1

3.9

34.8

41.6

Minor BPS

0.01

66.67

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028888

Chromosome:

PEDO01005449.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018979

462 - 3368

2907