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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005461.1_798_1236_F

Intron Information:

Intron Rank:

125804

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

798 - 1236

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

AAA|GTGTCCCCA

5'SS Class:

weak_major

3'SS Sequence:

AAGTGTCCCCAAA|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATGTCCCCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.2

44.9

38.8

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

32.7

-1

3.1

38.6

39.5

Minor 5ss

46.1

-0.4

2.7

56.7

42.1

Minor BPS

-0

64.65

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017770

Chromosome:

PEDO01005461.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036577

21 - 1515

1495