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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005493.1_1125_1295_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1125 - 1295

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCACGGATC

5'SS Class:

major

3'SS Sequence:

CCCAAATGCACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

CGGTCCTTAAAT

Flanking Amino Acid:

CTDPKCTDPKYPKCTVLKCT

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.3

77.6

33.6

Major BPS

0.5

1.1

76.9

32.8

Major PPT

56.4

0.15

48.6

Minor 5ss

27.9

-2.5

4.3

46.7

42.4

Minor BPS

0.74

1.5

78.08

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017628

Chromosome:

PEDO01005493.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033664

317 - 1351

1035