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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005506.1_3115_3174_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3115 - 3174

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCCGCCCG

5'SS Class:

major

3'SS Sequence:

GATCAGGGTTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GAGCTGTCGATC

Flanking Amino Acid:

SAAIVPALSPSPPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.2

46.8

42.6

Major BPS

59.9

0.25

1.3

70.1

Major PPT

43.7

-0.3

1.7

42.6

46.9

Minor 5ss

22.3

-3.2

3.8

38.2

Minor BPS

38.1

-0.9

40.05

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029175

Chromosome:

PEDO01005506.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022284

2002 - 3187

1186