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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005524.1_3829_3945_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3829 - 3945

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TGTTAGTAAACG

Flanking Amino Acid:

IKHWLDSPWPGFFTLDGQPR

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.2

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

66.3

0.37

0.8

29.5

Minor 5ss

34.7

-1.7

2.9

41.6

39.1

Minor BPS

46.2

-0.4

2.5

46.4

Associated Gene:

Gene:

OGDH

Ensembl Gene ID:

ENSAPLG00000016277

Chromosome:

PEDO01005524.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016985

54 - 8142

8089