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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005526.1_100_777_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

100 - 777

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

GTG|GTGGTGGTG

5'SS Class:

weak_major

3'SS Sequence:

GGTGGTGGTGGGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTTAC

U12 Branch Point Sequence:

CCACGGTTACCG

Flanking Amino Acid:

GRCGTPTVTGGGGGGFRTPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.1

49.4

41.2

Major BPS

47.6

-0.1

1.3

38.5

41.4

Major PPT

26.9

-1.3

3.3

34.4

45.4

Minor 5ss

26.2

-2.7

3.7

33.6

44.4

Minor BPS

36.2

-1.1

2.4

36.67

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027534

Chromosome:

PEDO01005526.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034078

21 - 1002

982