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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005541.1_1567_3088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1567 - 3088

Intron Length:

1522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAG

U12 Branch Point Sequence:

CGTGCCTTACCA

Flanking Amino Acid:

VRSPHYVHSTRSVDISPTRL

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.7

40.1

Major BPS

46.7

-0.2

1.7

60.8

45.4

Major PPT

74.3

0.55

0.9

70.1

36.5

Minor 5ss

37.3

-1.4

52.6

43.7

Minor BPS

59.2

0.28

1.8

67.6

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002547

Chromosome:

PEDO01005541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002629

21 - 13958

13938