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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005541.1_3254_3589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3254 - 3589

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

AGCCCAGGAACT

Flanking Amino Acid:

VKKRSSHGHASSHKRFPSTG

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

59.7

46.7

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

31.8

-2.1

38.6

46.5

Minor BPS

41.8

-0.5

2.2

59.15

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002547

Chromosome:

PEDO01005541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002629

21 - 13958

13938