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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005541.1_3828_4030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3828 - 4030

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTTGG

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACACAA

U12 Branch Point Sequence:

CTTCTCTCCACA

Flanking Amino Acid:

SLSDALVLEDEDSQVTSTIS

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

62.6

44.4

Major BPS

49.3

-0

0.9

56.6

29.3

Major PPT

81.3

0.71

0.7

26.2

Minor 5ss

38.7

-1.3

46.5

44.1

Minor BPS

48.6

-0.1

64.43

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002547

Chromosome:

PEDO01005541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002629

21 - 13958

13938