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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005541.1_5506_8296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5506 - 8296

Intron Length:

2791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTGCTTTCATT

Flanking Amino Acid:

DEQKILPKGEEAELERLERE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.2

0.75

0.8

76.2

37.6

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

56.8

0.3

1.9

74.65

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002547

Chromosome:

PEDO01005541.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002629

21 - 13958

13938