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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005552.1_702_1238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

702 - 1238

Intron Length:

537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

TCCTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAACAC

U12 Branch Point Sequence:

CCCCCCCCAACA

Flanking Amino Acid:

PPACPPLEPASAEEVHSFFQ

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

44.5

-0.3

46.6

34.6

Major PPT

85.3

0.79

0.7

80.1

25.2

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

46.1

-0.3

1.9

53.63

44.5

Associated Gene:

Gene:

QSOX1

Ensembl Gene ID:

ENSAPLG00000011109

Chromosome:

PEDO01005552.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011561

180 - 5037

4858