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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005561.1_3349_3430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3349 - 3430

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

CTCCCACCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGCTCAGCACCC

Flanking Amino Acid:

VQEPGQSPVFWYAPESLADN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

63.4

0.3

58.2

31.9

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

38.7

-0.8

2.4

52.34

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029145

Chromosome:

PEDO01005561.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045714

2873 - 5233

2361