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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005603.1_1844_2271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1844 - 2271

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CCTCCCAGGACC

Flanking Amino Acid:

TMAELNSIVGQQQLQQLSHH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

91.3

0.93

0.6

84.1

30.8

Minor 5ss

30.1

-2.3

2.9

41.8

Minor BPS

-0.2

1.8

57.18

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020849

Chromosome:

PEDO01005603.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026043

1532 - 2912

1381