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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005619.1_4532_4640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4532 - 4640

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

ACGTCCTGAGCA

Flanking Amino Acid:

QELAQATEAMDTWARQGLQL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

76.6

0.6

0.8

68.7

37.2

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

54.1

0.12

1.7

62.73

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028176

Chromosome:

PEDO01005619.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019788

99 - 5570

5472