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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005630.1_1087_6172_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1087 - 6172

Intron Length:

5086

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCTACGAC

5'SS Class:

weak_major

3'SS Sequence:

ACTGTGACATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TATACTGTGACA

Flanking Amino Acid:

SSEYFLLTIMPQCPPT*

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.3

47.1

42.7

Major BPS

0.62

1.1

77.2

Major PPT

60.4

0.23

1.1

56.7

42.8

Minor 5ss

27.3

-2.6

4.1

37.4

42.8

Minor BPS

51.1

0.03

2.1

67.76

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022294

Chromosome:

PEDO01005630.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019256

1066 - 6790

5725