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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005635.1_1338_2112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1338 - 2112

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TGTCCCTGAGCA

Flanking Amino Acid:

VEVEDAEDDMDCAASEPDVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

66.6

0.37

62.6

38.4

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

58.1

0.25

1.7

71.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026590

Chromosome:

PEDO01005635.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047332

521 - 4615

4095