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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005648.1_2144_5447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2144 - 5447

Intron Length:

3304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGTTCTTATCC

Flanking Amino Acid:

FTSPASPSNEFCLSEADKEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.7

0.85

0.7

80.8

31.1

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

69.9

0.6

1.6

77.62

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026262

Chromosome:

PEDO01005648.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043129

2084 - 20900

18817