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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005648.1_8123_8952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8123 - 8952

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATCAT

U12 Branch Point Sequence:

ATCATAGTAACC

Flanking Amino Acid:

CVLKMDHHCPWVNNCVGFSN

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

66.8

0.42

1.1

37.7

Major PPT

80.3

0.68

0.7

72.8

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

-0.4

2.2

58.07

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026262

Chromosome:

PEDO01005648.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043129

2084 - 20900

18817

ENSAPLT00000019070

2139 - 21250

19112