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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005654.1_8114_8263_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8114 - 8263

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGATGCCC

5'SS Class:

major

3'SS Sequence:

GTATAGGATGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAGGAT

U12 Branch Point Sequence:

CCATCCATACCG

Flanking Amino Acid:

DPASQGEAGGAGPHLSINPI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

38.8

Major BPS

50.9

0.02

1.4

51.5

43.9

Major PPT

44.9

-0.2

1.8

43.3

46.3

Minor 5ss

26.8

-2.7

3.1

31.2

36.3

Minor BPS

47.7

-0.3

52.77

47.5

Associated Gene:

Gene:

SCARA5

Ensembl Gene ID:

ENSAPLG00000029148

Chromosome:

PEDO01005654.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046400

2629 - 8390

5762