Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005673.1_2682_2770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2682 - 2770

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCGCGGG

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CCCCCGCTGACG

Flanking Amino Acid:

SLERLDTDLFRGRHHWVPAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

45.5

44.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

29.7

-2.3

3.4

37.4

47.3

Minor BPS

39.6

-0.9

2.3

40.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023550

Chromosome:

PEDO01005673.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032322

1222 - 2906

1685