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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005728.1_1505_1643_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1505 - 1643

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

CGTGGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAG

U12 Branch Point Sequence:

CCAGGGCCACCC

Flanking Amino Acid:

PHPLTFDPSNDTHVAYIEAA

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.2

30.8

Major BPS

40.5

-0.6

1.6

47.5

Major PPT

0.45

61.8

39.9

Minor 5ss

-2.3

3.1

37.1

40.4

Minor BPS

24.5

-1.9

2.2

26.97

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027862

Chromosome:

PEDO01005728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046037

21 - 4296

4276