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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005728.1_3867_4125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3867 - 4125

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TCCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAC

U12 Branch Point Sequence:

TTCTCCTTCCCC

Flanking Amino Acid:

AETQARQRVQKLSDGMERGG

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

64.5

41.5

Major BPS

45.4

-0.2

1.2

49.9

36.8

Major PPT

74.5

0.55

0.8

68.4

31.9

Minor 5ss

38.4

-1.3

3.4

50.1

40.9

Minor BPS

45.8

-0.3

3.6

73.91

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027862

Chromosome:

PEDO01005728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046037

21 - 4296

4276