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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005728.1_727_995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

727 - 995

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CGTTGCTCATCT

Flanking Amino Acid:

YPNAIEHTLQWARDEFEGLF

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

44.2

Major BPS

79.7

0.74

79.6

35.6

Major PPT

72.9

0.52

0.9

67.7

32.3

Minor 5ss

31.1

-2.2

3.2

39.3

46.1

Minor BPS

47.3

-0.1

2.2

68.81

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027862

Chromosome:

PEDO01005728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046037

21 - 4296

4276