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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005738.1_554_811_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

554 - 811

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCGCAGATC

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCGGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

ACCCCCTCATCC

Flanking Amino Acid:

LSEEEAIGFLPENIMLQDKD

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.2

62.9

38.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

58.3

0.19

0.9

51.4

31.3

Minor 5ss

19.5

-3.5

29.8

38.3

Minor BPS

47.4

-0.2

1.8

54.44

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028200

Chromosome:

PEDO01005738.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041006

9 - 946

938