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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005776.1_41954_42461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41954 - 42461

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

TAAAACAGAACT

Flanking Amino Acid:

IAYWTNFARTGDPNTGYSDV

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

0.4

1.1

66.5

36.3

Major PPT

89.9

0.9

0.6

83.9

31.1

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

46.6

-0.1

1.9

66.88

42.3

Associated Gene:

Gene:

CEL

Ensembl Gene ID:

ENSAPLG00000003416

Chromosome:

PEDO01005776.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003513

40767 - 47531

6765