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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_1028_1112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1028 - 1112

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TCTCGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGGCAC

U12 Branch Point Sequence:

CGTGCCGGCACC

Flanking Amino Acid:

VWHPECFVCADCLTGFASGS

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

40.2

-0.6

1.3

40.4

Major PPT

71.5

0.49

0.8

61.9

34.8

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

39.8

-0.8

2.4

51.35

45.6

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025559

46 - 4835

4790

ENSAPLT00000020993

228 - 4835

4608

ENSAPLT00000038140

228 - 2308

2081

ENSAPLT00000020651

228 - 2378

2151

ENSAPLT00000029235

21 - 1379

1359

ENSAPLT00000028312

55 - 2308

2254