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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_1037_1304_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1037 - 1304

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCGGGCTG

5'SS Class:

weak_major

3'SS Sequence:

CTGCCTGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

AGCACTTCATCT

Flanking Amino Acid:

PECFVCAVSGLHKGSFREHA

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.1

1.4

46.1

49.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

55.9

0.13

1.1

49.3

43.8

Minor 5ss

27.9

-2.5

3.4

30.1

42.9

Minor BPS

46.2

-0.2

1.8

60.11

43.3

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029435

12 - 1379

1368