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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_1367_1417_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1367 - 1417

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCTCTTCCT

5'SS Class:

weak_major

3'SS Sequence:

AGCCCCCCGTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTTAG

U12 Branch Point Sequence:

CCGCTCTTAGCC

Flanking Amino Acid:

DKMYCQPCHDNTGRMLKGLH

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.4

55.6

Major BPS

55.1

0.13

1.5

42.7

Major PPT

58.3

0.19

35.8

Minor 5ss

23.6

-3

3.8

35.2

34.1

Minor BPS

49.8

-0

1.6

54.8

43.6

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020993

228 - 4835

4608

ENSAPLT00000025559

46 - 4835

4790