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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_5090_5125_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5090 - 5125

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAGGGGCT

5'SS Class:

weak_major

3'SS Sequence:

CGTGCTGGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGGAA

U12 Branch Point Sequence:

TGCTGGGGAAGG

Flanking Amino Acid:

KTGAAWLGLVVTSSHCLVLQ

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

57.9

38.1

Major BPS

42.9

-0.4

1.5

34.8

43.8

Major PPT

47.1

-0.1

1.2

41.5

Minor 5ss

32.5

-2

3.9

47.6

Minor BPS

29.5

-1.6

2.7

35.99

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006855

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007165

4062 - 9667

5606