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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_573_650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

573 - 650

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ACCCCCTCACCC

Flanking Amino Acid:

CAYCAGPIREKVLTAMDQTW

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.56

0.7

24.7

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

47.3

-0.2

1.8

54.28

43.6

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020651

228 - 2378

2151

ENSAPLT00000026980

152 - 2378

2227

ENSAPLT00000038140

228 - 2308

2081

ENSAPLT00000025559

46 - 4835

4790

ENSAPLT00000029435

12 - 1379

1368

ENSAPLT00000024802

36 - 4905

4870

ENSAPLT00000029235

21 - 1379

1359

ENSAPLT00000020993

228 - 4835

4608

ENSAPLT00000028312

55 - 2308

2254