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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_5882_6118_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5882 - 6118

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGGCT

5'SS Class:

major

3'SS Sequence:

GTCCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

GCTTCCTTACAC

Flanking Amino Acid:

AVDARNKELIGKHAIPSLVK

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

66.9

38.5

Major BPS

68.9

0.47

59.6

38.6

Major PPT

73.6

0.53

0.8

64.7

36.4

Minor 5ss

26.9

-2.7

3.5

39.6

45.9

Minor BPS

60.5

0.31

1.8

68.33

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006855

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007165

4062 - 9667

5606