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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_733_878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

733 - 878

Intron Length:

146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTTCT

5'SS Class:

major

3'SS Sequence:

ACCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

AGCCCTGGAATT

Flanking Amino Acid:

THCGKVFGDDGFHERKGKPY

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.2

67.9

37.4

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

68.6

0.42

0.8

61.8

28.1

Minor 5ss

45.4

-0.5

2.4

57.6

40.9

Minor BPS

43.5

-0.4

57.14

39.8

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029235

21 - 1379

1359

ENSAPLT00000029435

12 - 1379

1368