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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_794_846_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

794 - 846

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCTTTCCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCTCTCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGGCAC

U12 Branch Point Sequence:

TCCCCGGGCACC

Flanking Amino Acid:

SPLPPSQPCLGPGIDPGTLP

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

52.8

42.4

Major BPS

39.1

-0.6

1.3

38.2

41.7

Major PPT

61.2

0.25

58.9

30.4

Minor 5ss

26.3

-2.7

3.6

28.8

35.5

Minor BPS

-1.3

2.6

43.78

44.1

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038140

228 - 2308

2081