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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_879_926_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

879 - 926

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTCCACG

5'SS Class:

weak_major

3'SS Sequence:

CAGGACTTCATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCGGAA

U12 Branch Point Sequence:

GCCGCCAGGACT

Flanking Amino Acid:

LELIPAPSPQPSSPPSAKAV

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.8

0.11

1.3

45.4

Major BPS

43.4

-0.4

1.3

34.8

34.9

Major PPT

57.7

0.17

0.9

49.7

38.7

Minor 5ss

47.7

-0.2

2.2

59.3

44.9

Minor BPS

44.6

-0.3

1.9

57.48

45.1

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026980

152 - 2378

2227

ENSAPLT00000024802

36 - 4905

4870