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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005800.1_961_1053_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

961 - 1053

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCCCCTGAC

5'SS Class:

weak_major

3'SS Sequence:

GGCTGGGCTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAG

U12 Branch Point Sequence:

TGCGCGGTGAGT

Flanking Amino Acid:

SSPPSAKAVSGERASPKPCR

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

54.3

44.4

Major BPS

-0.5

1.6

32.2

43.7

Major PPT

49.1

-0

1.2

44.5

41.6

Minor 5ss

-3.1

34.7

41.8

Minor BPS

36.6

-0.9

2.7

54.9

47.4

Associated Gene:

Gene:

LPXN

Ensembl Gene ID:

ENSAPLG00000027655

Chromosome:

PEDO01005800.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026980

152 - 2378

2227

ENSAPLT00000024802

36 - 4905

4870