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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005812.1_4659_5719_R

Intron Information:

Intron Rank:

147272

Intron Class:

major

Intron Phase:

Intron Coordinates:

4659 - 5719

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GATTTCACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

81.9

0.72

0.9

78.3

39.6

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

0.24

1.8

75.44

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026563

Chromosome:

PEDO01005812.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036152

3819 - 8498

4680