Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005818.1_2982_3073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2982 - 3073

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGCG

5'SS Class:

major

3'SS Sequence:

TCTGTGCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GGTCCGGTGACC

Flanking Amino Acid:

GAFLVLPLHKTGRIDKSYPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

59.5

39.8

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

75.1

0.57

0.9

68.9

37.1

Minor 5ss

23.9

-3

3.3

29.6

43.4

Minor BPS

42.6

-0.6

2.6

56.92

41.7

Associated Gene:

Gene:

CORO1B

Ensembl Gene ID:

ENSAPLG00000023559

Chromosome:

PEDO01005818.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043473

291 - 3602

3312

ENSAPLT00000005521

21 - 3602

3582