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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005825.1_405_486_F

Intron Information:

Intron Rank:

132230

Intron Class:

major

Intron Phase:

Intron Coordinates:

405 - 486

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

GCACCCTAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

71.5

0.48

0.8

64.4

31.1

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

0.17

1.7

61.6

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021041

Chromosome:

PEDO01005825.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041974

28 - 1654

1627

ENSAPLT00000039548

161 - 1654

1494