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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005825.1_532_611_F

Intron Information:

Intron Rank:

132231

Intron Class:

major

Intron Phase:

Intron Coordinates:

532 - 611

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CGCTCCGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

TGTGCCCTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

63.9

0.31

0.9

54.2

36.6

Minor 5ss

32.4

-2

2.9

32.4

41.9

Minor BPS

58.5

0.34

1.9

79.15

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021041

Chromosome:

PEDO01005825.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039548

161 - 1654

1494

ENSAPLT00000041974

28 - 1654

1627