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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01005852.1_300_1443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

300 - 1443

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGCAG

5'SS Class:

major

3'SS Sequence:

TTTCTACCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GGCTCTCTAACC

Flanking Amino Acid:

APPVPAATDPGSKTQGVVQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.4

51.4

Major BPS

72.3

0.55

73.3

28.9

Major PPT

78.9

0.65

0.8

70.7

35.1

Minor 5ss

24.1

-3

3.2

43.5

Minor BPS

57.3

0.21

1.7

64.59

40.8

Associated Gene:

Gene:

SNCB

Ensembl Gene ID:

ENSAPLG00000017857

Chromosome:

PEDO01005852.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036917

21 - 2623

2603